A pan-genomics study “Efficient Construction of a Complete Index for Pan-Genomics Read Alignment” that we worked on with many collaborators — University of Florida (Boucher Lab), CeBiB and Diego Portales University (Travis Gagie), and University of Eastern Piedmond (Giovanni Manzini) — was accepted at the RECOMB2019 conference in Washington DC. Congratulations to Taher Mun, who led our lab’s portion of the work.
A preprint describing this work is available on bioRxiv: https://doi.org/10.1101/472423.
The version of the r-index software described in that study is available at https://github.com/alshai/r-index.